pkg/49079: devel/gobject-introspection needs shoehorning of path to separate pkgsrc install

Discussion:

t***@uni-hamburg.de

2014-08-06 15:20:00 UTC

Number: 49079
Category: pkg
Synopsis: devel/gobject-introspection needs shoehorning of path to separate pkgsrc install
Confidential: no
Severity: serious
Priority: low
Responsible: pkg-manager
State: open
Class: sw-bug
Submitter-Id: net
Arrival-Date: Wed Aug 06 15:20:00 +0000 2014
Originator: Thomas Orgis
Release: pkgsrc-2014Q2

Universität Hamburg
Linux host 3.0.93-0.8-default #1 SMP Tue Aug 27 08:44:18 UTC 2013 (70ed288) x86_64 x86_64 x86_64 GNU/Linux
I install pkgsrc in a separate location to freshen up the software environemnt in a SuSE Linux Enterprise Server 11.3 setup.

One package getting into an issue with old versions of things in /usr is devel/gobject-introspection. It finds 'gir' files p.ex. for old system pango in /usr, while it should use the fresh one installed into /some/prefix/pkgsrc/.

This leads to build failures of various software in the stack.
Have a rusty base system with existing .gir files for gobject-introspection and install pkgsrc into a separate prefix. Any build that uses g-ir-scanner or g-ir-compiler possibly finds an outdated file and fails, although up-to-date files are installed in pkgsrc prefix. I'll include a crude patch that solves the problem for me.

PS: I have another hack in buildlink3 in plac that prevents system libs overriding pkgsrc ones (disabling BUILDLINK_LIBDIRS at a certain point). This should be independent from this issue though. All in all, the case with possibly present old versions in the base system is not the everyday one, I presume.
Index: devel/gobject-introspection/Makefile
===================================================================
RCS file: /cvsroot/pkgsrc/devel/gobject-introspection/Makefile,v
retrieving revision 1.40
diff -r1.40 Makefile
49a50,61

# Enforce pkgsrc install of gir stuff to be first in search path.
# I am assuming that we should not encode $DESTDIR in the installed
# wrapper script. -- ThOr
${MV} ${DESTDIR}${PREFIX}/bin/g-ir-scanner ${DESTDIR}${PREFIX}/bin/g-ir-scanner.plain
chmod +x ${DESTDIR}${PREFIX}/bin/g-ir-scanner
${MV} ${DESTDIR}${PREFIX}/bin/g-ir-compiler ${DESTDIR}${PREFIX}/bin/g-ir-compiler.plain
chmod +x ${DESTDIR}${PREFIX}/bin/g-ir-compiler

Index: devel/gobject-introspection/PLIST
===================================================================
RCS file: /cvsroot/pkgsrc/devel/gobject-introspection/PLIST,v
retrieving revision 1.6
diff -r1.6 PLIST
3a4

bin/g-ir-compiler.plain

5a7

bin/g-ir-scanner.plain

Joerg Sonnenberger

2014-09-17 09:35:00 UTC

Permalink

The following reply was made to PR pkg/49079; it has been noted by GNATS.

From: Joerg Sonnenberger <***@britannica.bec.de>
To: gnats-***@NetBSD.org
Cc:
Subject: Re: pkg/49079: devel/gobject-introspection needs shoehorning of path
to separate pkgsrc install
Date: Wed, 17 Sep 2014 11:33:38 +0200

Post by t***@uni-hamburg.de
Index: devel/gobject-introspection/Makefile
===================================================================
RCS file: /cvsroot/pkgsrc/devel/gobject-introspection/Makefile,v
retrieving revision 1.40
diff -r1.40 Makefile
49a50,61

bin/g-ir-compiler.plain

5a7

bin/g-ir-scanner.plain

Please use diff -u.

Joerg

Thomas Orgis

2014-09-23 11:10:05 UTC

Permalink

The following reply was made to PR pkg/49079; it has been noted by GNATS.

From: Thomas Orgis <***@uni-hamburg.de>
To: gnats-***@NetBSD.org
Cc:
Subject: Re: pkg/49079: devel/gobject-introspection needs shoehorning of
path to separate pkgsrc install
Date: Tue, 23 Sep 2014 10:07:46 +0200

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Am Wed, 17 Sep 2014 09:35:00 +0000 (UTC)

Post by Joerg Sonnenberger
Please use diff -u.

Better?

--=20
Dr. Thomas Orgis
Universit=C3=A4t Hamburg
RRZ / Zentrale Dienste / HPC
Schl=C3=BCterstr. 70
20146 Hamburg
Tel.: 040/42838 8826
Fax: 040/428 38 6270

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Index: devel/gobject-introspection/PLIST
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
--- devel/gobject-introspection/PLIST
+++ devel/gobject-introspection/PLIST
@@ -1,8 +1,10 @@
@comment $NetBSD: PLIST,v 1.6 2013/12/08 13:28:27 prlw1 Exp $
bin/g-ir-annotation-tool
bin/g-ir-compiler
+bin/g-ir-compiler.plain
bin/g-ir-generate
bin/g-ir-scanner
+bin/g-ir-scanner.plain
include/gobject-introspection-1.0/giarginfo.h
include/gobject-introspection-1.0/gibaseinfo.h
include/gobject-introspection-1.0/gicallableinfo.h
Index: devel/gobject-introspection/Makefile
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=
=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D=3D
--- devel/gobject-introspection/Makefile (Revision 4)
+++ devel/gobject-introspection/Makefile (Revision 5)
@@ -47,6 +47,18 @@
#.include "../../graphics/cairo-gobject/buildlink3.mk"
#TEST_TARGET=3D check
=20
+# Enforce pkgsrc install of gir stuff to be first in search path.
+# I am assuming that we should not encode $DESTDIR in the installed
+# wrapper script. -- ThOr
+post-install:
+ ${MV} ${DESTDIR}${PREFIX}/bin/g-ir-scanner ${DESTDIR}${PREFIX}/bin/g-ir-s=
canner.plain
+ printf "#!/bin/sh\nexec \$$0.plain --add-include-path=3D${PREFIX}/share/g=
ir-1.0 \"\$$@\"\n" > ${DESTDIR}${PREFIX}/bin/g-ir-scanner
+ chmod +x ${DESTDIR}${PREFIX}/bin/g-ir-scanner
+ ${MV} ${DESTDIR}${PREFIX}/bin/g-ir-compiler ${DESTDIR}${PREFIX}/bin/g-ir-=
compiler.plain
+ printf "#!/bin/sh\nexec \$$0.plain --includedir=3D${PREFIX}/share/gir-1.0=
\"\$$@\"\n" > ${DESTDIR}${PREFIX}/bin/g-ir-compiler
+ chmod +x ${DESTDIR}${PREFIX}/bin/g-ir-compiler
+
+
BUILDLINK_API_DEPENDS.glib2+=3D glib2>=3D2.36.0
.include "../../devel/glib2/buildlink3.mk"
BUILDLINK_API_DEPENDS.libffi+=3D libffi>=3D3.0.0

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--Sig_/.T5PAeZIYMG5phZAa/K7RAR--

OBATA Akio

2014-09-23 11:40:01 UTC

Permalink

Thomas Orgis

2014-09-23 20:40:01 UTC

Permalink

The following reply was made to PR pkg/49079; it has been noted by GNATS.

From: Thomas Orgis <***@uni-hamburg.de>
To: gnats-***@NetBSD.org
Cc:
Subject: Re: pkg/49079: devel/gobject-introspection needs shoehorning of
path to separate pkgsrc install
Date: Tue, 23 Sep 2014 22:39:25 +0200

--Sig_/iHPT9sJM/7SwFj/d1KQohzi
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: quoted-printable

Am Tue, 23 Sep 2014 11:40:01 +0000 (UTC)

Post by OBATA Akio
Do you have XDG_DATA_DIRS environment variable containing /usr/share?

Hm, yes. This is the default in a login shell on the SLES install.

XDG_CONFIG_DIRS=3D/etc/xdg
XDG_DATA_DIRS=3D/usr/share:/etc/opt/kde3/share:/opt/kde3/share

I didn't think of that. So, should one manipulate these variables
before trying to build gtk stuff from pkgsrc? This is probably just
more of the fun stuff trying to isolate pkgsrc from outside
influence ...

Alrighty then,

Thomas

--=20
Dr. Thomas Orgis
Universit=C3=A4t Hamburg
RRZ / Zentrale Dienste / HPC
Schl=C3=BCterstr. 70
20146 Hamburg
Tel.: 040/42838 8826
Fax: 040/428 38 6270

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--Sig_/iHPT9sJM/7SwFj/d1KQohzi--

OBATA Akio

2014-09-24 01:40:01 UTC

Permalink

Post by Thomas Orgis

Post by OBATA Akio
Do you have XDG_DATA_DIRS environment variable containing /usr/share?

Hm, yes. This is the default in a login shell on the SLES install.
XDG_CONFIG_DIRS=/etc/xdg
XDG_DATA_DIRS=/usr/share:/etc/opt/kde3/share:/opt/kde3/share
I didn't think of that. So, should one manipulate these variables
before trying to build gtk stuff from pkgsrc? This is probably just
more of the fun stuff trying to isolate pkgsrc from outside
influence ...

Such variables will be preferred over default settings and affect to
not only build but also runtime. So you should set proper variable.

--
OBATA Akio / ***@lins.jp

Thomas Orgis

2014-09-25 08:20:00 UTC

Permalink

The following reply was made to PR pkg/49079; it has been noted by GNATS.

From: Thomas Orgis <***@uni-hamburg.de>
To: gnats-***@NetBSD.org
Cc:
Subject: Re: pkg/49079: devel/gobject-introspection needs shoehorning of
path to separate pkgsrc install
Date: Thu, 25 Sep 2014 10:19:32 +0200

--Sig_/zO7dn2BZeaBS+I82PeOv5KQ
Content-Type: text/plain; charset=ISO-8859-1
Content-Transfer-Encoding: quoted-printable

Am Wed, 24 Sep 2014 01:40:01 +0000 (UTC)

Post by OBATA Akio
Such variables will be preferred over default settings and affect to
not only build but also runtime. So you should set proper variable.

If this is considered works-as-designed due to the environment, it
would be nice to point out that caveat in the documentation for pkgsrc
on systems that might overlap with it in the base install (so,
basically, all non-BSD). A section collecting usual variables that may
conflict with pkgsrc in unusual ways. At least I wouldn't think of an
install of gtk/glib/whatnot picking up object descriptions from some
random place and not where the stuff matching the used library
containing said objects is installed. Of course you cannot blame pkgsrc
for weird behaviour of upstream stuff.

Alrighty then,

Thomas

--=20
Dr. Thomas Orgis
Universit=E4t Hamburg
RRZ / Zentrale Dienste / HPC
Schl=FCterstr. 70
20146 Hamburg
Tel.: 040/42838 8826
Fax: 040/428 38 6270

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--Sig_/zO7dn2BZeaBS+I82PeOv5KQ--

OBATA Akio

2014-09-26 01:35:01 UTC

Permalink

The following reply was made to PR pkg/49079; it has been noted by GNATS.

From: "OBATA Akio" <***@lins.jp>
To: gnats-***@netbsd.org
Cc:
Subject: Re: pkg/49079: devel/gobject-introspection needs shoehorning of path
to separate pkgsrc install
Date: Fri, 26 Sep 2014 10:30:25 +0900

Could you asked to SLES support instead?

It is not a pkgsrc specific problem, and I don't know the solution.

If such XDG_DATA_DIRS setting is really required for SLES,
1. put ${LOCALBASE}/share on top of XDG_DATA_DIRS, and
SLES native applications may not work as expected.
2. put ${LOCALBASE}/share on last of XDG_DATA_DIRS, and
applications installed into ${LOCALBASE} may not work as expected.

Thomas Orgis

2014-09-26 08:25:01 UTC

Permalink

The following reply was made to PR pkg/49079; it has been noted by GNATS.

From: Thomas Orgis <***@uni-hamburg.de>
To: gnats-***@NetBSD.org
Cc:
Subject: Re: pkg/49079: devel/gobject-introspection needs shoehorning of
path to separate pkgsrc install
Date: Fri, 26 Sep 2014 10:19:46 +0200

--Sig_/6xalqiG_=eC3JkS5YG_wOmf
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: quoted-printable

Am Fri, 26 Sep 2014 01:35:01 +0000 (UTC)

Post by Joerg Sonnenberger
The following reply was made to PR pkg/49079; it has been noted by GNATS.
=20
Cc:=20
Subject: Re: pkg/49079: devel/gobject-introspection needs shoehorning of =

path

Post by Joerg Sonnenberger
to separate pkgsrc install
Date: Fri, 26 Sep 2014 10:30:25 +0900
=20
Could you asked to SLES support instead?

Honenstly, I cannot imagine what they could say on the matter apart
from "Use our package repositories, and, anyway, please update your
installation.". I do guess that the solution has to be to put pkgsrc in
the XDG paths for desktop stuff to be found in general. If there's
something mixed with base install and pkgsrc, it could get funny.

I stumbled upon this one:

http://mail-index.netbsd.org/pkgsrc-users/2012/06/27/msg016631.html

and the follow-up

http://mail-index.netbsd.org/pkgsrc-users/2012/06/27/msg016632.html

I wonder what Matthias meant with "A real fix will come soon.";-)

Oh, and I have to agree with Matthias on "using XDG_DATA_DIRS in any
build tool is wrong".

Alrighty then,

Thomas

--=20
Dr. Thomas Orgis
Universit=C3=A4t Hamburg
RRZ / Zentrale Dienste / HPC
Schl=C3=BCterstr. 70
20146 Hamburg
Tel.: 040/42838 8826
Fax: 040/428 38 6270

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--Sig_/6xalqiG_=eC3JkS5YG_wOmf--

OBATA Akio

2014-09-26 09:30:01 UTC

Permalink

Post by Thomas Orgis
Oh, and I have to agree with Matthias on "using XDG_DATA_DIRS in any
build tool is wrong".

From XDG Base Directory Specification, it is right behavior to use
XDG_DATA_DIRS before system default directories.

--
OBATA Akio / ***@lins.jp

Thomas Orgis

2014-09-26 11:55:00 UTC

Permalink

The following reply was made to PR pkg/49079; it has been noted by GNATS.

From: Thomas Orgis <***@uni-hamburg.de>
To: gnats-***@NetBSD.org
Cc:
Subject: Re: pkg/49079: devel/gobject-introspection needs shoehorning of
path to separate pkgsrc install
Date: Fri, 26 Sep 2014 13:52:22 +0200

--Sig_/nDoCUY2lbQwLQh19rjH5Tnc
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Am Fri, 26 Sep 2014 09:30:01 +0000 (UTC)

Post by OBATA Akio
From XDG Base Directory Specification, it is right behavior to use
XDG_DATA_DIRS before system default directories.

The point at hand, as I understood it, is if the XDG specification
shuild apply to the build process of system infrastructure like that
gobject stuff. I'm not sure about the scope of this spec.

I'll see what happens with differing values for these variables. One
open question for me is what happens if XDG_DATA_DIRS is unset. The
specification says that then,

/usr/local/share/:/usr/share/

should be used. That clearly also would break pkgsrc (I notice the
trailing slashes ... what's that about? I copied from the spec.). So,
is pkgsrc already modifying the specification here to make things work
in absence of XDG_DATA_DIRS?

I'm in the process of preparing another pkgsrc build and will try to
test some cases ...

Alrighty then,

Thomas

--=20
Dr. Thomas Orgis
Universit=E4t Hamburg
RRZ / Zentrale Dienste / HPC
Schl=FCterstr. 70
20146 Hamburg
Tel.: 040/42838 8826
Fax: 040/428 38 6270

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--Sig_/nDoCUY2lbQwLQh19rjH5Tnc--

OBATA Akio

2014-09-26 12:30:00 UTC

Permalink

The following reply was made to PR pkg/49079; it has been noted by GNATS.

From: "OBATA Akio" <***@lins.jp>
To: gnats-***@netbsd.org
Cc:
Subject: Re: pkg/49079: devel/gobject-introspection needs shoehorning of path
to separate pkgsrc install
Date: Fri, 26 Sep 2014 21:26:25 +0900

I once rose head-up about XDG spec violation of pkgsrc, but no feedback.
So I gave up to find the solution.

Pkgsrc provides workaround to prevent garbage environment variables
from affecting to build process.

PKGSRC_SETENV= ${SETENV} -i